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Subject: Catalog Files : More info
In case this helps regarding my previous post :
Mosaics$ java com.icl.saxon.StyleSheet -x
org.apache.xml.resolver.tools.ResolvingXMLReader -y
org.apache.xml.resolver.tools.ResolvingXMLReader -r
org.apache.xml.resolver.tools.CatalogResolver -u -o classyMos.html
GeneticMosaics_test1.xml docbook.xsl
Loading catalog:
file:/Users/fiedler/Celegans_DocBook/software/catalog.xml
Loading catalog:
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/
docbook.cat
Resolved URI: GeneticMosaics_test1.xml
file:/Users/fiedler/Celegans_DocBook/Samples/Mosaics/
GeneticMosaics_test1.xml
Resolved URI: docbook.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
docbook.xsl
Resolved URI: ../VERSION
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
VERSION
Resolved URI: param.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
param.xsl
Resolved URI: ../lib/lib.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/lib/
lib.xsl
Resolved URI: ../common/l10n.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/l10n.xsl
Resolved URI: ../common/common.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/common.xsl
Resolved URI: ../common/labels.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/labels.xsl
Resolved URI: ../common/titles.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/titles.xsl
Resolved URI: ../common/subtitles.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/subtitles.xsl
Resolved URI: ../common/gentext.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/gentext.xsl
Resolved URI: ../common/targets.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/targets.xsl
Resolved URI: ../common/olink.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/olink.xsl
Resolved URI: ../common/pi.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/pi.xsl
Resolved URI: autotoc.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
autotoc.xsl
Resolved URI: autoidx.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
autoidx.xsl
Resolved URI: lists.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
lists.xsl
Resolved URI: callout.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
callout.xsl
Resolved URI: verbatim.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
verbatim.xsl
Resolved URI: graphics.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
graphics.xsl
Resolved URI: xref.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
xref.xsl
Resolved URI: formal.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
formal.xsl
Resolved URI: table.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
table.xsl
Resolved URI: ../common/table.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/
common/table.xsl
Resolved URI: htmltbl.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
htmltbl.xsl
Resolved URI: sections.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
sections.xsl
Resolved URI: inline.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
inline.xsl
Resolved URI: footnote.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
footnote.xsl
Resolved URI: html.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
html.xsl
Resolved URI: info.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
info.xsl
Resolved URI: keywords.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
keywords.xsl
Resolved URI: division.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
division.xsl
Resolved URI: toc.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
toc.xsl
Resolved URI: index.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
index.xsl
Resolved URI: refentry.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
refentry.xsl
Resolved URI: math.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
math.xsl
Resolved URI: admon.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
admon.xsl
Resolved URI: component.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
component.xsl
Resolved URI: biblio.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
biblio.xsl
Resolved URI: glossary.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
glossary.xsl
Resolved URI: block.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
block.xsl
Resolved URI: task.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
task.xsl
Resolved URI: qandaset.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
qandaset.xsl
Resolved URI: synop.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
synop.xsl
Resolved URI: titlepage.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
titlepage.xsl
Resolved URI: titlepage.templates.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
titlepage.templates.xsl
Resolved URI: pi.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
pi.xsl
Resolved URI: ebnf.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
ebnf.xsl
Resolved URI: chunker.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
chunker.xsl
Resolved URI: html-rtf.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
html-rtf.xsl
Resolved URI: docbookng.xsl
file:/Users/fiedler/Celegans_DocBook/software/docbook-xsl-1.67.2/html/
docbookng.xsl
Resolved system:
http://www.oasis-open.org/docbook/xml/4.3b2/docbookx.dtd
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/
docbookx.dtd
Resolved public: -//OASIS//ENTITIES DocBook Notations V4.3//EN
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/
dbnotnx.mod
Resolved public: -//OASIS//ENTITIES DocBook Character Entities V4.3//EN
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/
dbcentx.mod
Resolved public: ISO 8879:1986//ENTITIES Added Math Symbols: Arrow
Relations//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
amsa.ent
Resolved public: ISO 8879:1986//ENTITIES Added Math Symbols: Binary
Operators//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
amsb.ent
Resolved public: ISO 8879:1986//ENTITIES Added Math Symbols:
Delimiters//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
amsc.ent
Resolved public: ISO 8879:1986//ENTITIES Added Math Symbols: Negated
Relations//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
amsn.ent
Resolved public: ISO 8879:1986//ENTITIES Added Math Symbols:
Ordinary//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
amso.ent
Resolved public: ISO 8879:1986//ENTITIES Added Math Symbols:
Relations//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
amsr.ent
Resolved public: ISO 8879:1986//ENTITIES Box and Line Drawing//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
box.ent
Resolved public: ISO 8879:1986//ENTITIES Russian Cyrillic//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
cyr1.ent
Resolved public: ISO 8879:1986//ENTITIES Non-Russian Cyrillic//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
cyr2.ent
Resolved public: ISO 8879:1986//ENTITIES Diacritical Marks//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
dia.ent
Resolved public: ISO 8879:1986//ENTITIES Greek Letters//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
grk1.ent
Resolved public: ISO 8879:1986//ENTITIES Monotoniko Greek//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
grk2.ent
Resolved public: ISO 8879:1986//ENTITIES Greek Symbols//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
grk3.ent
Resolved public: ISO 8879:1986//ENTITIES Alternative Greek
Symbols//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
grk4.ent
Resolved public: ISO 8879:1986//ENTITIES Added Latin 1//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
lat1.ent
Resolved public: ISO 8879:1986//ENTITIES Added Latin 2//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
lat2.ent
Resolved public: ISO 8879:1986//ENTITIES Numeric and Special
Graphic//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
num.ent
Resolved public: ISO 8879:1986//ENTITIES Publishing//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
pub.ent
Resolved public: ISO 8879:1986//ENTITIES General Technical//EN//XML
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/ent/iso-
tech.ent
Resolved public: -//OASIS//ELEMENTS DocBook Information Pool V4.3//EN
file:/Users/fiedler/Celegans_DocBook/software/docbook-xml-4.3/
dbpoolx.mod
Error on line 3599 column 1 of
file:/Users/fiedler/Celegans_DocBook/Samples/Mosaics/
GeneticMosaics_test1.xml:
Error reported by XML parser: Cannot read from
file:/Users/fiedler/Celegans_DocBook/Samples/Mosaics/htmltblx.mod
(/Users/fiedler/Celegans_DocBook/Samples/Mosaics/htmltblx.mod (No such
file or directory))
Transformation failed: Run-time errors were reported
Cheers,
Tristan
------------------------------
Tristan J. Fiedler
Postdoctoral Fellow - Stein Lab
Cold Spring Harbor Laboratory
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